SNP Report
Name | rs12593600   dbSNP |
---|---|
Location | chr:15,91201771 |
Allele | T/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10083547 | 0.87[EUR][1000 genomes] |
rs12439713 | 1.00[CEU][hapmap];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12442167 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12443446 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs12593637 | 0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12595333 | 0.85[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs16944705 | 0.83[EUR][1000 genomes] |
rs17180345 | 0.81[AFR][1000 genomes];0.81[EUR][1000 genomes] |
rs3743402 | 0.81[EUR][1000 genomes] |
rs3803565 | 0.81[EUR][1000 genomes] |
rs4306478 | 0.81[AMR][1000 genomes] |
rs4343256 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs4506872 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs4534817 | 0.83[AMR][1000 genomes];0.81[EUR][1000 genomes] |
rs7495772 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
ENSG00000245479 | Proximal transcriptional regulation |
UNC45A | Distal transcriptional regulation |
HDDC3 | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014