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rVarBase
SNP Report
Basic Infomation
Name
rs12435329  
dbSNP
Location
chr:14,69250891
Allele
T/C
LD-proxy of rSNPs(r
2
>0.8) (count: 9)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11158763
0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12434551
0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12889006
0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2236262
0.81[EUR][1000 genomes]
rs3825568
0.83[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4899257
0.92[AMR][1000 genomes]
rs4902647
0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7146217
0.92[ASN][1000 genomes]
rs7146491
0.90[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
ENSG00000259038
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)