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rVarBase
SNP Report
Basic Infomation
Name
rs4899257  
dbSNP
Location
chr:14,69253984
Allele
G/T
LD-proxy of rSNPs(r
2
>0.8) (count: 8)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11158763
0.91[AMR][1000 genomes]
rs12434551
0.91[AMR][1000 genomes]
rs12435329
0.92[AMR][1000 genomes]
rs36132266
0.80[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs4902647
0.91[AMR][1000 genomes]
rs7151054
0.85[CHB][hapmap];0.82[JPT][hapmap]
rs747854
0.90[EUR][1000 genomes]
rs9635254
0.82[JPT][hapmap]
rSNP related genes
Symbol
Regulation type
SLC16A3
Distal transcriptional regulation
RAD51B
Distal transcriptional regulation
ENSG00000259038
Distal transcriptional regulation
RNU1-5
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)