SNP Report
Basic Infomation
| Name | rs12226294 dbSNP |
|---|---|
| Location | chr:11,62008961 |
| Allele | G/T |
LD-proxy of rSNPs(r2>0.8) (count: 21)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11230910 | 0.88[JPT][hapmap] |
| rs11230914 | 0.85[JPT][hapmap] |
| rs11230917 | 0.88[JPT][hapmap] |
| rs11602735 | 0.88[JPT][hapmap] |
| rs11606620 | 0.85[JPT][hapmap] |
| rs1675128 | 0.88[JPT][hapmap] |
| rs1675129 | 0.88[JPT][hapmap] |
| rs1792949 | 0.88[JPT][hapmap] |
| rs3862389 | 0.88[JPT][hapmap] |
| rs3867137 | 0.88[JPT][hapmap] |
| rs4144906 | 0.88[JPT][hapmap] |
| rs4963285 | 1.00[JPT][hapmap] |
| rs4963459 | 0.88[JPT][hapmap] |
| rs4963460 | 0.88[JPT][hapmap] |
| rs4963462 | 0.88[JPT][hapmap] |
| rs7102807 | 0.88[JPT][hapmap] |
| rs7122395 | 0.88[JPT][hapmap] |
| rs7924786 | 0.85[JPT][hapmap] |
| rs7924923 | 0.88[JPT][hapmap] |
| rs7930687 | 0.88[JPT][hapmap] |
| rs7935766 | 0.88[JPT][hapmap] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| SCGB1D2 | Proximal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014