SNP Report
Name | rs12021783   dbSNP |
---|---|
Location | chr:1,113949328 |
Allele | A/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10458458 | 1.00[AFR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs10458459 | 1.00[AFR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs10857994 | 0.84[ASN][1000 genomes] |
rs11102627 | 0.93[ASN][1000 genomes] |
rs11102628 | 0.93[ASN][1000 genomes] |
rs11102630 | 0.93[ASN][1000 genomes] |
rs11102636 | 0.80[EUR][1000 genomes] |
rs11102637 | 0.80[EUR][1000 genomes] |
rs11102638 | 0.80[EUR][1000 genomes] |
rs11102640 | 0.80[EUR][1000 genomes] |
rs11102641 | 0.80[EUR][1000 genomes] |
rs11102644 | 0.80[EUR][1000 genomes] |
rs1112085 | 0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1112543 | 1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs12022213 | 1.00[AFR][1000 genomes];0.80[EUR][1000 genomes] |
rs12022849 | 1.00[AFR][1000 genomes] |
rs12023641 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12024139 | 1.00[AFR][1000 genomes] |
rs12024428 | 0.99[ASN][1000 genomes] |
rs12025806 | 0.80[EUR][1000 genomes] |
rs12026682 | 1.00[AFR][1000 genomes] |
rs12029305 | 0.89[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs12030900 | 0.90[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs12032395 | 1.00[AFR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs12033666 | 0.80[EUR][1000 genomes] |
rs12034178 | 1.00[AFR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs12038473 | 1.00[AFR][1000 genomes];0.80[EUR][1000 genomes] |
rs12039226 | 1.00[AFR][1000 genomes];0.80[EUR][1000 genomes] |
rs12039669 | 1.00[AFR][1000 genomes];0.80[EUR][1000 genomes] |
rs12039944 | 1.00[AFR][1000 genomes];0.80[EUR][1000 genomes] |
rs12043827 | 0.87[AFR][1000 genomes] |
rs12044485 | 1.00[AFR][1000 genomes];0.80[EUR][1000 genomes] |
rs12045148 | 1.00[AFR][1000 genomes] |
rs12046450 | 1.00[AFR][1000 genomes];0.80[EUR][1000 genomes] |
rs12046451 | 1.00[AFR][1000 genomes] |
rs12049093 | 0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs12049447 | 0.92[AMR][1000 genomes];0.89[EUR][1000 genomes] |
rs12567622 | 1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs12568854 | 0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs1418607 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1539411 | 1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1573996 | 1.00[AFR][1000 genomes] |
rs1936926 | 1.00[AFR][1000 genomes];0.80[EUR][1000 genomes] |
rs1936927 | 1.00[AFR][1000 genomes];0.80[EUR][1000 genomes] |
rs1936928 | 0.80[EUR][1000 genomes] |
rs2027536 | 0.97[ASN][1000 genomes] |
rs2027537 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2359413 | 1.00[AFR][1000 genomes] |
rs2884705 | 1.00[AFR][1000 genomes] |
rs4839320 | 1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs55737954 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs66565865 | 0.92[AMR][1000 genomes];0.89[EUR][1000 genomes] |
rs6688827 | 0.99[ASN][1000 genomes] |
rs72687924 | 1.00[AFR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs72687938 | 0.80[EUR][1000 genomes] |
rs72687939 | 0.80[EUR][1000 genomes] |
rs72687944 | 1.00[AFR][1000 genomes];0.80[EUR][1000 genomes] |
rs72687947 | 1.00[AFR][1000 genomes];0.80[EUR][1000 genomes] |
rs72687948 | 1.00[AFR][1000 genomes];0.80[EUR][1000 genomes] |
rs72687949 | 0.80[EUR][1000 genomes] |
rs72687961 | 1.00[AFR][1000 genomes] |
rs7413018 | 1.00[AFR][1000 genomes];0.80[EUR][1000 genomes] |
rs9787276 | 0.99[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
MAGI3 | Distal transcriptional regulation |
MAGI3 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014