SNP Report
Name | rs66565865   dbSNP |
---|---|
Location | chr:1,113923579 |
Allele | G/A |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10458458 | 0.80[EUR][1000 genomes] |
rs1112085 | 0.88[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs1112543 | 0.92[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs12021783 | 0.92[AMR][1000 genomes];0.89[EUR][1000 genomes] |
rs12023641 | 0.92[AMR][1000 genomes];0.89[EUR][1000 genomes] |
rs12033092 | 1.00[AFR][1000 genomes];0.84[AMR][1000 genomes];0.98[ASN][1000 genomes] |
rs12033935 | 0.84[ASN][1000 genomes] |
rs12049093 | 0.88[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs12049447 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs12567622 | 0.92[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs12568854 | 0.89[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs1418607 | 0.92[AMR][1000 genomes];0.89[EUR][1000 genomes] |
rs1539411 | 0.92[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs2027537 | 0.92[AMR][1000 genomes];0.89[EUR][1000 genomes] |
rs4839320 | 0.92[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs55737954 | 0.92[AMR][1000 genomes];0.89[EUR][1000 genomes] |
Symbol | Regulation type |
---|---|
ENSG00000238198 | Distal transcriptional regulation |
LRIG2 | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014