SNP Report

Basic Infomation

Name	rs11832160 dbSNP
Location	chr:12,49040711
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 55)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11168620	1.00[ASN][1000 genomes]
rs11168659	0.96[CEU][hapmap];0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11168660	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11168680	0.96[CEU][hapmap];0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11168690	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11168691	0.96[CEU][hapmap];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11168692	0.87[CEU][hapmap];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11168693	1.00[ASN][1000 genomes]
rs11168694	1.00[ASN][1000 genomes]
rs11168695	1.00[ASN][1000 genomes]
rs11168699	1.00[ASN][1000 genomes]
rs11168700	1.00[ASN][1000 genomes]
rs11168701	1.00[ASN][1000 genomes]
rs11168708	1.00[ASN][1000 genomes]
rs11168722	1.00[ASN][1000 genomes]
rs11168727	1.00[ASN][1000 genomes]
rs12366919	1.00[ASN][1000 genomes]
rs17123362	1.00[ASN][1000 genomes]
rs17834622	0.85[CEU][hapmap];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1895994	0.96[CEU][hapmap];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2409084	0.96[CEU][hapmap];0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3013	0.96[CEU][hapmap];0.83[AMR][1000 genomes];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4132370	0.96[CEU][hapmap];0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55644947	1.00[ASN][1000 genomes]
rs56182935	1.00[ASN][1000 genomes]
rs61942009	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61942011	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs61942012	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61942013	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61942018	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61942047	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61942048	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61942049	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61942051	0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs61942052	0.81[AMR][1000 genomes]
rs61942053	0.81[AMR][1000 genomes]
rs61942058	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61942059	1.00[ASN][1000 genomes]
rs61943194	1.00[ASN][1000 genomes]
rs6580694	0.88[CEU][hapmap];1.00[ASN][1000 genomes]
rs7138342	1.00[ASN][1000 genomes]
rs7295027	0.96[CEU][hapmap];0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7295138	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7296987	1.00[ASN][1000 genomes]
rs7303113	1.00[CEU][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73108510	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73108566	0.81[AMR][1000 genomes]
rs74088163	1.00[ASN][1000 genomes]
rs7964801	1.00[ASN][1000 genomes]
rs7966343	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7966463	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7975102	0.96[CEU][hapmap];0.95[YRI][hapmap];0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7977935	1.00[ASN][1000 genomes]
rs7979508	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs953673	1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
KANSL2	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)