SNP Report

Basic Infomation

Name	rs61942011 dbSNP
Location	chr:12,49021292
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 40)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11168659	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11168660	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11168680	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11168690	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11168691	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11168692	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11168693	0.90[EUR][1000 genomes]
rs11168694	0.90[EUR][1000 genomes]
rs11168695	0.90[EUR][1000 genomes]
rs11168699	0.86[EUR][1000 genomes]
rs11168700	0.86[EUR][1000 genomes]
rs11168701	0.84[EUR][1000 genomes]
rs11832160	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12366919	0.86[EUR][1000 genomes]
rs17834622	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1895994	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2409084	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs3013	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4132370	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs61942009	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61942012	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61942013	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61942018	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61942047	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61942048	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs61942049	0.98[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61942051	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs61942052	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs61942053	0.95[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs61942058	0.91[EUR][1000 genomes]
rs61942059	0.86[EUR][1000 genomes]
rs7295027	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7295138	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7303113	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs73108510	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs73108566	0.87[AMR][1000 genomes]
rs7964801	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7966343	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7966463	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7979508	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
OR11M1P	Proximal transcriptional regulation
ENSG00000188825	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)