SNP Report

Basic Infomation

Name	rs11817194 dbSNP
Location	chr:10,93765001
Allele	G/T

LD-proxy of rSNPs(r²>0.8) (count: 69)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10509640	1.00[JPT][hapmap]
rs10786026	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10882019	0.84[JPT][hapmap]
rs1104012	0.81[JPT][hapmap]
rs1107947	0.82[ASN][1000 genomes]
rs11812701	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11816821	0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11817266	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11818046	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11818808	0.89[ASN][1000 genomes]
rs11819184	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12254369	1.00[JPT][hapmap]
rs12256118	0.84[JPT][hapmap]
rs12263532	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap]
rs17107472	0.84[JPT][hapmap]
rs1711850	0.84[JPT][hapmap]
rs17349172	0.82[ASN][1000 genomes]
rs17364211	0.89[ASN][1000 genomes]
rs1935864	0.84[JPT][hapmap]
rs2048901	1.00[JPT][hapmap]
rs2138701	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2252200	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2421796	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2676804	0.83[EUR][1000 genomes]
rs2676824	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2792019	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs35535933	1.00[ASN][1000 genomes]
rs4509678	1.00[JPT][hapmap]
rs45611639	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4565820	0.89[ASN][1000 genomes]
rs4642987	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs55732480	0.89[ASN][1000 genomes]
rs61874749	0.90[ASN][1000 genomes]
rs61874751	0.82[ASN][1000 genomes]
rs6583801	0.84[JPT][hapmap]
rs7070076	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap]
rs7071217	0.89[ASN][1000 genomes]
rs7072906	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7094274	0.89[ASN][1000 genomes]
rs7095552	0.82[ASN][1000 genomes]
rs72807234	0.89[ASN][1000 genomes]
rs72807240	0.89[ASN][1000 genomes]
rs72807242	0.89[ASN][1000 genomes]
rs72807247	0.89[ASN][1000 genomes]
rs72807254	0.89[ASN][1000 genomes]
rs72807268	0.89[ASN][1000 genomes]
rs72807269	0.89[ASN][1000 genomes]
rs72807274	0.89[ASN][1000 genomes]
rs72807278	0.89[ASN][1000 genomes]
rs72807282	0.89[ASN][1000 genomes]
rs72823181	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72823185	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72823189	0.90[ASN][1000 genomes]
rs72823191	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72823200	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72823201	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72825305	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72825306	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72825315	0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7897761	0.82[ASN][1000 genomes]
rs7899706	0.89[ASN][1000 genomes]
rs7909870	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap]
rs7911552	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7912721	0.88[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs833363	0.89[ASN][1000 genomes]
rs833364	0.84[JPT][hapmap]
rs833365	0.84[JPT][hapmap]
rs833368	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs833380	0.84[JPT][hapmap]

rSNP related genes

Symbol	Regulation type
BTAF1	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)