SNP Report

Basic Infomation

Name	rs7071217 dbSNP
Location	chr:10,93939162
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 37)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11812701	0.89[ASN][1000 genomes]
rs11816821	0.92[CEU][hapmap];1.00[CHB][hapmap];0.89[ASN][1000 genomes]
rs11817194	0.89[ASN][1000 genomes]
rs11817266	0.89[ASN][1000 genomes]
rs11818046	0.89[ASN][1000 genomes]
rs11818808	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11819184	0.92[CEU][hapmap];1.00[CHB][hapmap];0.89[ASN][1000 genomes]
rs17364211	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[LWK][hapmap];0.91[MEX][hapmap];1.00[MKK][hapmap];0.90[TSI][hapmap];0.96[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17365265	0.82[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];0.80[MEX][hapmap];0.96[TSI][hapmap];0.87[ASN][1000 genomes]
rs2138701	0.89[ASN][1000 genomes]
rs2421796	0.89[ASN][1000 genomes]
rs35535933	0.89[ASN][1000 genomes]
rs45611639	0.89[ASN][1000 genomes]
rs4565820	1.00[CHB][hapmap];0.91[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55732480	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7072906	0.89[ASN][1000 genomes]
rs7094274	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72807234	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72807240	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72807242	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72807247	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72807254	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72807268	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72807269	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72807274	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72807278	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72807282	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72807288	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72823181	0.89[ASN][1000 genomes]
rs72823185	0.89[ASN][1000 genomes]
rs72823191	0.89[ASN][1000 genomes]
rs72823200	0.89[ASN][1000 genomes]
rs72823201	0.89[ASN][1000 genomes]
rs72825305	0.89[ASN][1000 genomes]
rs72825306	0.89[ASN][1000 genomes]
rs7899706	0.94[AMR][1000 genomes];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs833363	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
CPEB3	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 1)