SNP Report
Basic Infomation
| Name | rs17365265 dbSNP |
|---|---|
| Location | chr:10,94095165 |
| Allele | A/G |
LD-proxy of rSNPs(r2>0.8) (count: 23)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10509644 | 1.00[YRI][hapmap] |
| rs1057848 | 1.00[YRI][hapmap] |
| rs11186923 | 1.00[YRI][hapmap] |
| rs11186926 | 1.00[YRI][hapmap] |
| rs11818808 | 0.87[ASN][1000 genomes] |
| rs17364211 | 0.87[ASN][1000 genomes] |
| rs4565820 | 0.87[ASN][1000 genomes] |
| rs55732480 | 0.87[ASN][1000 genomes] |
| rs7071217 | 0.82[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];0.80[MEX][hapmap];0.96[TSI][hapmap];0.87[ASN][1000 genomes] |
| rs7094274 | 0.85[CEU][hapmap];1.00[CHB][hapmap];0.87[ASN][1000 genomes] |
| rs72807234 | 0.87[ASN][1000 genomes] |
| rs72807240 | 0.87[ASN][1000 genomes] |
| rs72807242 | 0.87[ASN][1000 genomes] |
| rs72807247 | 0.87[ASN][1000 genomes] |
| rs72807254 | 0.87[ASN][1000 genomes] |
| rs72807268 | 0.87[ASN][1000 genomes] |
| rs72807269 | 0.87[ASN][1000 genomes] |
| rs72807274 | 0.87[ASN][1000 genomes] |
| rs72807278 | 0.87[ASN][1000 genomes] |
| rs72807282 | 0.88[AFR][1000 genomes];0.87[ASN][1000 genomes] |
| rs72807288 | 0.87[ASN][1000 genomes] |
| rs7899706 | 0.87[ASN][1000 genomes] |
| rs833363 | 0.87[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| MARCH5 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 1)
| eQTL related gene | Source |
|---|---|
| FLJ30679 | SCAN |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014