SNP Report
Basic Infomation
| Name | rs10509644 dbSNP |
|---|---|
| Location | chr:10,94094762 |
| Allele | G/A |
LD-proxy of rSNPs(r2>0.8) (count: 28)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs1057848 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap] |
| rs10882031 | 0.83[CHB][hapmap];0.86[JPT][hapmap] |
| rs10882037 | 0.83[CHB][hapmap];0.86[JPT][hapmap] |
| rs11186839 | 0.84[CHB][hapmap];0.86[JPT][hapmap] |
| rs11186841 | 0.83[CHB][hapmap];0.86[JPT][hapmap] |
| rs11186852 | 0.83[CHB][hapmap];0.86[JPT][hapmap] |
| rs11186859 | 0.84[CHB][hapmap];0.86[JPT][hapmap] |
| rs11186860 | 0.89[CHB][hapmap] |
| rs11186866 | 0.84[CHB][hapmap];0.86[JPT][hapmap] |
| rs11186870 | 0.84[CHB][hapmap];0.86[JPT][hapmap] |
| rs11186875 | 0.84[CHB][hapmap];0.86[JPT][hapmap] |
| rs11186879 | 0.83[CHB][hapmap];0.86[JPT][hapmap] |
| rs11186884 | 0.83[CHB][hapmap];0.86[JPT][hapmap] |
| rs11186888 | 0.84[CHB][hapmap];0.86[JPT][hapmap] |
| rs11186894 | 0.83[CHB][hapmap];0.85[JPT][hapmap] |
| rs11186895 | 0.81[CHB][hapmap];0.84[JPT][hapmap] |
| rs11186898 | 0.83[CHB][hapmap];0.86[JPT][hapmap] |
| rs11186923 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap] |
| rs11186926 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap] |
| rs17107517 | 0.83[CHB][hapmap];0.86[JPT][hapmap] |
| rs17365265 | 1.00[YRI][hapmap] |
| rs2421831 | 0.84[CHB][hapmap];0.86[JPT][hapmap] |
| rs3781230 | 0.83[CHB][hapmap];0.86[JPT][hapmap] |
| rs6583802 | 0.84[CHB][hapmap];0.86[JPT][hapmap] |
| rs7067935 | 0.83[CHB][hapmap];0.86[JPT][hapmap] |
| rs7088903 | 0.83[CHB][hapmap];0.86[JPT][hapmap] |
| rs746842 | 0.84[CHB][hapmap];1.00[JPT][hapmap] |
| rs9787608 | 0.83[CHB][hapmap];0.86[JPT][hapmap] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| MARCH5 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014