SNP Report

Basic Infomation

Name	rs11186926 dbSNP
Location	chr:10,94098321
Allele	G/C

LD-proxy of rSNPs(r²>0.8) (count: 40)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10509644	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs1057848	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap];0.89[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.88[ASN][1000 genomes]
rs10786035	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10882031	0.83[CHB][hapmap];0.86[JPT][hapmap]
rs10882037	0.83[CHB][hapmap];0.86[JPT][hapmap]
rs11186839	0.83[CHB][hapmap];0.86[JPT][hapmap]
rs11186841	0.83[CHB][hapmap];0.86[JPT][hapmap]
rs11186852	0.83[CHB][hapmap];0.86[JPT][hapmap]
rs11186859	0.83[CHB][hapmap];0.86[JPT][hapmap]
rs11186860	0.89[CHB][hapmap]
rs11186866	0.83[CHB][hapmap];0.86[JPT][hapmap]
rs11186870	0.83[CHB][hapmap];0.86[JPT][hapmap]
rs11186875	0.83[CHB][hapmap];0.86[JPT][hapmap]
rs11186879	0.83[CHB][hapmap];0.86[JPT][hapmap]
rs11186884	0.83[CHB][hapmap];0.86[JPT][hapmap]
rs11186888	0.83[CHB][hapmap];0.86[JPT][hapmap]
rs11186894	0.83[CHB][hapmap];0.85[JPT][hapmap]
rs11186895	0.81[CHB][hapmap];0.84[JPT][hapmap]
rs11186898	0.83[CHB][hapmap];0.86[JPT][hapmap]
rs11186899	0.94[AFR][1000 genomes];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11186903	0.94[AFR][1000 genomes];0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11186910	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11186912	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11186923	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.89[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11186931	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11186932	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12358967	0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17107517	0.83[CHB][hapmap];0.86[JPT][hapmap]
rs17365265	1.00[YRI][hapmap]
rs1812851	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2421831	0.83[CHB][hapmap];0.86[JPT][hapmap]
rs3781230	0.83[CHB][hapmap];0.86[JPT][hapmap]
rs61875240	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs61875241	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61875243	0.87[ASN][1000 genomes]
rs6583802	0.83[CHB][hapmap];0.86[JPT][hapmap]
rs7067935	0.83[CHB][hapmap];0.86[JPT][hapmap]
rs7088903	0.83[CHB][hapmap];0.86[JPT][hapmap]
rs746842	0.83[CHB][hapmap];1.00[JPT][hapmap]
rs9787608	0.83[CHB][hapmap];0.86[JPT][hapmap]

rSNP related genes

Symbol	Regulation type
MARCH5	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)