SNP Report
Basic Infomation
| Name | rs1104012 dbSNP |
|---|---|
| Location | chr:10,93819103 |
| Allele | G/A |
LD-proxy of rSNPs(r2>0.8) (count: 24)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10509640 | 0.80[JPT][hapmap] |
| rs10786026 | 0.86[JPT][hapmap] |
| rs10882019 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap] |
| rs11817194 | 0.81[JPT][hapmap] |
| rs12254369 | 0.82[JPT][hapmap] |
| rs12256118 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs12263532 | 0.91[JPT][hapmap] |
| rs17107472 | 1.00[JPT][hapmap] |
| rs1711850 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap] |
| rs1935864 | 1.00[JPT][hapmap] |
| rs2048901 | 0.80[JPT][hapmap] |
| rs2252200 | 0.80[JPT][hapmap] |
| rs2676824 | 0.80[JPT][hapmap] |
| rs2792019 | 0.81[JPT][hapmap] |
| rs4509678 | 0.81[JPT][hapmap] |
| rs4642987 | 0.80[JPT][hapmap] |
| rs6583801 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap] |
| rs7070076 | 0.80[JPT][hapmap] |
| rs7909870 | 0.81[JPT][hapmap] |
| rs7912721 | 0.93[JPT][hapmap] |
| rs833364 | 0.93[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap] |
| rs833365 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap] |
| rs833368 | 0.80[JPT][hapmap] |
| rs833380 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| CPEB3 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014