SNP Report

Basic Infomation

Name	rs11697746 dbSNP
Location	chr:20,62471606
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 38)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11086128	0.92[AMR][1000 genomes]
rs11086129	0.95[AMR][1000 genomes]
rs11086130	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes]
rs11697082	0.84[AMR][1000 genomes]
rs11697094	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11698037	0.84[AMR][1000 genomes]
rs11700177	0.92[AMR][1000 genomes]
rs11700373	0.95[AMR][1000 genomes]
rs12479805	0.87[AMR][1000 genomes]
rs12481524	0.92[AMR][1000 genomes]
rs12624434	0.82[AFR][1000 genomes];0.83[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs12624502	0.83[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs12624512	0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs4809238	0.92[AMR][1000 genomes];0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4809360	0.92[AMR][1000 genomes]
rs4809368	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes]
rs55643250	0.84[AMR][1000 genomes]
rs60086020	0.95[AMR][1000 genomes]
rs6010653	0.82[AMR][1000 genomes]
rs6010675	0.91[AFR][1000 genomes];0.80[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6010676	0.83[ASN][1000 genomes]
rs6011116	0.84[AMR][1000 genomes]
rs6011117	0.82[AMR][1000 genomes]
rs6011118	0.82[AMR][1000 genomes]
rs6011119	0.82[AMR][1000 genomes]
rs6011159	0.92[AMR][1000 genomes]
rs6062547	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs66493913	0.84[AMR][1000 genomes]
rs66641436	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs66788614	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes]
rs66791168	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs66887040	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs67047102	0.84[AMR][1000 genomes]
rs67517207	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes]
rs67542556	0.84[AMR][1000 genomes]
rs67796606	0.82[AMR][1000 genomes]
rs73624755	0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs755920	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ZBTB46	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)