SNP Report
Basic Infomation
| Name | rs6010676 dbSNP |
|---|---|
| Location | chr:20,62470580 |
| Allele | T/C |
LD-proxy of rSNPs(r2>0.8) (count: 53)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11086129 | 0.83[ASN][1000 genomes] |
| rs11086130 | 0.85[ASN][1000 genomes] |
| rs11697094 | 0.82[ASN][1000 genomes] |
| rs11697746 | 0.83[ASN][1000 genomes] |
| rs11700372 | 0.81[ASN][1000 genomes] |
| rs11700373 | 0.83[ASN][1000 genomes] |
| rs11905798 | 0.86[AFR][1000 genomes] |
| rs11905801 | 0.84[AFR][1000 genomes] |
| rs11905851 | 0.87[AFR][1000 genomes] |
| rs11908253 | 0.87[AFR][1000 genomes] |
| rs12479805 | 0.82[ASN][1000 genomes] |
| rs12481524 | 0.81[ASN][1000 genomes] |
| rs2004748 | 0.80[ASN][1000 genomes] |
| rs2004749 | 0.80[ASN][1000 genomes] |
| rs2315657 | 0.81[ASN][1000 genomes] |
| rs4369919 | 0.81[ASN][1000 genomes] |
| rs4809234 | 0.85[ASN][1000 genomes] |
| rs4809236 | 0.85[ASN][1000 genomes] |
| rs4809362 | 0.86[ASN][1000 genomes] |
| rs4809363 | 0.86[ASN][1000 genomes] |
| rs4809364 | 0.85[ASN][1000 genomes] |
| rs4809365 | 0.83[ASN][1000 genomes] |
| rs4809366 | 0.85[ASN][1000 genomes] |
| rs4809367 | 0.84[ASN][1000 genomes] |
| rs4809368 | 0.83[ASN][1000 genomes] |
| rs60086020 | 0.83[ASN][1000 genomes] |
| rs6011152 | 0.81[ASN][1000 genomes] |
| rs6011156 | 0.83[ASN][1000 genomes] |
| rs6011157 | 0.84[ASN][1000 genomes] |
| rs6011158 | 0.84[ASN][1000 genomes] |
| rs6011159 | 0.80[ASN][1000 genomes] |
| rs6011160 | 0.84[ASN][1000 genomes] |
| rs6011161 | 0.84[ASN][1000 genomes] |
| rs6011163 | 0.85[ASN][1000 genomes] |
| rs6011164 | 0.85[ASN][1000 genomes] |
| rs6011166 | 0.81[ASN][1000 genomes] |
| rs6011168 | 0.85[ASN][1000 genomes] |
| rs6011169 | 0.85[ASN][1000 genomes] |
| rs6011170 | 0.84[ASN][1000 genomes] |
| rs6011171 | 0.84[ASN][1000 genomes] |
| rs6011173 | 0.84[ASN][1000 genomes] |
| rs6011179 | 0.85[AFR][1000 genomes] |
| rs6011180 | 0.85[AFR][1000 genomes] |
| rs6011183 | 0.82[AFR][1000 genomes] |
| rs66788614 | 0.85[ASN][1000 genomes] |
| rs66791168 | 0.91[ASN][1000 genomes] |
| rs66887040 | 0.85[ASN][1000 genomes] |
| rs67517207 | 0.85[ASN][1000 genomes] |
| rs67563752 | 0.85[ASN][1000 genomes] |
| rs67675495 | 0.85[ASN][1000 genomes] |
| rs73325392 | 0.82[AFR][1000 genomes] |
| rs73325395 | 0.82[AFR][1000 genomes] |
| rs755920 | 0.85[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ZBTB46 | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014