SNP Report
Name | rs6011157   dbSNP |
---|---|
Location | chr:20,62451760 |
Allele | C/T |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs11086127 | 0.87[AFR][1000 genomes];0.85[AMR][1000 genomes];0.88[EUR][1000 genomes] |
rs11086128 | 0.83[ASN][1000 genomes] |
rs11086129 | 0.96[ASN][1000 genomes] |
rs11086130 | 0.94[ASN][1000 genomes] |
rs11697261 | 0.88[AFR][1000 genomes];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs11698072 | 0.87[AFR][1000 genomes];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs11699536 | 0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes] |
rs11699646 | 0.83[AFR][1000 genomes];0.89[EUR][1000 genomes] |
rs11700177 | 0.82[ASN][1000 genomes] |
rs11700372 | 0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs11700373 | 0.94[ASN][1000 genomes] |
rs11905140 | 0.88[AFR][1000 genomes];0.84[AMR][1000 genomes];0.88[EUR][1000 genomes] |
rs11906437 | 0.88[AFR][1000 genomes];0.86[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs11906513 | 0.87[AFR][1000 genomes];0.83[AMR][1000 genomes];0.88[EUR][1000 genomes] |
rs11906517 | 0.88[AFR][1000 genomes];0.84[AMR][1000 genomes];0.88[EUR][1000 genomes] |
rs11908487 | 0.88[AFR][1000 genomes];0.86[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs11908565 | 0.83[AMR][1000 genomes];0.88[EUR][1000 genomes] |
rs12479805 | 0.95[ASN][1000 genomes] |
rs12481524 | 0.97[ASN][1000 genomes] |
rs1887407 | 0.84[AFR][1000 genomes] |
rs2004748 | 0.98[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs2004749 | 0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs2281929 | 0.88[AMR][1000 genomes] |
rs2315657 | 1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs4369919 | 1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs4538263 | 0.88[AMR][1000 genomes];0.85[EUR][1000 genomes] |
rs4578911 | 0.86[AFR][1000 genomes] |
rs4809229 | 0.90[AMR][1000 genomes];0.81[EUR][1000 genomes] |
rs4809233 | 0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs4809234 | 0.99[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs4809236 | 0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs4809345 | 0.85[AMR][1000 genomes];0.88[EUR][1000 genomes] |
rs4809348 | 0.88[AFR][1000 genomes];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs4809349 | 0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes] |
rs4809350 | 0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes] |
rs4809351 | 0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs4809352 | 0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs4809353 | 0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs4809354 | 0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs4809356 | 0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs4809357 | 0.87[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs4809358 | 0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs4809359 | 0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs4809360 | 0.83[ASN][1000 genomes] |
rs4809362 | 0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs4809363 | 0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs4809364 | 0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs4809365 | 0.99[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs4809366 | 0.98[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs4809367 | 0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs4809368 | 0.94[ASN][1000 genomes] |
rs4991876 | 0.83[AFR][1000 genomes];0.83[EUR][1000 genomes] |
rs4991877 | 0.83[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs57498343 | 0.87[AFR][1000 genomes];0.86[EUR][1000 genomes] |
rs57620666 | 0.88[AMR][1000 genomes];0.83[EUR][1000 genomes] |
rs58150746 | 0.88[AFR][1000 genomes];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs60022917 | 0.81[AFR][1000 genomes] |
rs60086020 | 0.96[ASN][1000 genomes] |
rs6010655 | 0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.85[EUR][1000 genomes] |
rs6010656 | 0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.85[EUR][1000 genomes] |
rs6010658 | 0.88[AFR][1000 genomes];0.84[AMR][1000 genomes];0.88[EUR][1000 genomes] |
rs6010659 | 0.88[AFR][1000 genomes];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs6010660 | 0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs6010661 | 0.85[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs6010663 | 0.82[AFR][1000 genomes] |
rs6010664 | 0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs6010665 | 0.82[AFR][1000 genomes] |
rs6010669 | 0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs6010671 | 0.99[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs6010676 | 0.84[ASN][1000 genomes] |
rs6011121 | 0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.83[EUR][1000 genomes] |
rs6011124 | 0.85[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs6011125 | 0.88[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes] |
rs6011126 | 0.88[AFR][1000 genomes];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs6011127 | 0.83[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs6011128 | 0.86[AFR][1000 genomes];0.80[AMR][1000 genomes];0.89[EUR][1000 genomes] |
rs6011129 | 0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes] |
rs6011130 | 0.87[AFR][1000 genomes];0.80[AMR][1000 genomes];0.89[EUR][1000 genomes] |
rs6011131 | 0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs6011137 | 0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs6011138 | 0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs6011139 | 0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs6011140 | 0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs6011141 | 0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs6011142 | 0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs6011143 | 0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs6011144 | 0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs6011145 | 0.82[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs6011146 | 0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs6011148 | 0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs6011152 | 0.87[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs6011154 | 0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs6011156 | 0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs6011158 | 0.87[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6011159 | 0.96[ASN][1000 genomes] |
rs6011160 | 0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6011161 | 0.99[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6011163 | 0.98[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs6011164 | 0.98[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs6011165 | 0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs6011166 | 0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs6011167 | 0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs6011168 | 0.92[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs6011169 | 0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs6011170 | 0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs6011171 | 0.80[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs6011173 | 0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs6011175 | 0.81[AFR][1000 genomes] |
rs6011176 | 0.80[AFR][1000 genomes] |
rs61653788 | 0.85[AFR][1000 genomes] |
rs66682622 | 0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs66780440 | 0.87[AFR][1000 genomes];0.84[AMR][1000 genomes];0.88[EUR][1000 genomes] |
rs66788614 | 0.94[ASN][1000 genomes] |
rs66791168 | 0.84[ASN][1000 genomes] |
rs66818106 | 0.92[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs66859979 | 0.88[AFR][1000 genomes];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs66887040 | 0.90[ASN][1000 genomes] |
rs67078803 | 0.87[AFR][1000 genomes];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs67416152 | 0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs67517207 | 0.94[ASN][1000 genomes] |
rs67549383 | 0.88[AFR][1000 genomes];0.84[AMR][1000 genomes];0.88[EUR][1000 genomes] |
rs67563752 | 0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs67675495 | 0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs67835080 | 0.87[AFR][1000 genomes];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs7348841 | 0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs73624722 | 0.90[AMR][1000 genomes];0.82[EUR][1000 genomes] |
rs73624724 | 0.87[AFR][1000 genomes];0.82[AMR][1000 genomes];0.81[EUR][1000 genomes] |
rs73624726 | 0.88[AFR][1000 genomes];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs751860 | 0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs751861 | 0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs755017 | 0.83[AMR][1000 genomes] |
rs755920 | 0.94[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
ABHD16B | Distal transcriptional regulation |
SLC2A4RG | Distal transcriptional regulation |
ZBTB46 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014