SNP Report
Name | rs66641436   dbSNP |
---|---|
Location | chr:20,62480243 |
Allele | T/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs11086128 | 0.84[AMR][1000 genomes] |
rs11086129 | 0.87[AMR][1000 genomes] |
rs11086130 | 0.87[AMR][1000 genomes] |
rs11697094 | 0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs11697746 | 0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs11700177 | 0.84[AMR][1000 genomes] |
rs11700373 | 0.87[AMR][1000 genomes] |
rs12481524 | 0.84[AMR][1000 genomes] |
rs12624434 | 0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs12624502 | 0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs12624512 | 0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs4809238 | 1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs4809239 | 0.81[AMR][1000 genomes] |
rs4809360 | 0.84[AMR][1000 genomes] |
rs4809368 | 0.87[AMR][1000 genomes] |
rs60086020 | 0.87[AMR][1000 genomes] |
rs6011159 | 0.84[AMR][1000 genomes] |
rs6011186 | 0.83[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs6062547 | 0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs66788614 | 0.87[AMR][1000 genomes] |
rs66791168 | 0.92[AMR][1000 genomes] |
rs66887040 | 0.92[AMR][1000 genomes] |
rs67517207 | 0.87[AMR][1000 genomes] |
rs73624755 | 0.94[AMR][1000 genomes];0.80[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs755920 | 0.87[AMR][1000 genomes] |
Symbol | Regulation type |
---|---|
ENSG00000269223 | Proximal transcriptional regulation |
SLC2A4RG | Distal transcriptional regulation |
ZBTB46 | Distal transcriptional regulation |
ZGPAT | Distal transcriptional regulation |
ARFRP1 | Distal transcriptional regulation |
ENSG00000269223 | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014