SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 13)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs17081792	0.85[CHD][hapmap]
rs1788237	0.86[YRI][hapmap]
rs1788242	0.83[LWK][hapmap];0.86[YRI][hapmap]
rs1788243	0.83[YRI][hapmap]
rs1788244	0.89[CEU][hapmap];0.84[GIH][hapmap];0.95[MEX][hapmap];0.95[TSI][hapmap];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1790599	0.86[YRI][hapmap]
rs1790930	0.88[JPT][hapmap]
rs1790945	0.94[ASN][1000 genomes]
rs1790969	0.82[LWK][hapmap]
rs1790971	0.86[YRI][hapmap]
rs7237611	0.84[TSI][hapmap]
rs7237727	0.85[TSI][hapmap]
rs999146	0.83[YRI][hapmap]

rSNP related genes

Symbol	Regulation type
CD226	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)