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rVarBase
SNP Report
Basic Infomation
Name
rs17081792  
dbSNP
Location
chr:18,67554408
Allele
T/C
LD-proxy of rSNPs(r
2
>0.8) (count: 8)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs1124980
0.85[CHD][hapmap]
rs17081667
0.83[EUR][1000 genomes]
rs17081712
0.83[EUR][1000 genomes]
rs17081715
0.83[EUR][1000 genomes]
rs17081734
0.82[CHB][hapmap];0.82[CHD][hapmap];1.00[GIH][hapmap];0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs17081766
1.00[CHB][hapmap];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1790930
0.85[CHB][hapmap]
rs57613010
1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
CD226
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)