SNP Report
Name | rs11145960   dbSNP |
---|---|
Location | chr:9,139311284 |
Allele | A/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10870168 | 1.00[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs11145769 | 0.83[AMR][1000 genomes] |
rs11145932 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs11145958 | 1.00[AMR][1000 genomes];0.82[EUR][1000 genomes] |
rs11145972 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs11145982 | 0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12235378 | 1.00[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs3812549 | 1.00[AMR][1000 genomes] |
rs3812553 | 1.00[AMR][1000 genomes] |
rs3812561 | 0.83[AMR][1000 genomes];0.89[EUR][1000 genomes] |
rs3812580 | 0.96[EUR][1000 genomes];0.80[ASN][1000 genomes] |
rs57052773 | 0.83[AMR][1000 genomes] |
rs57295785 | 0.83[AMR][1000 genomes];0.82[EUR][1000 genomes] |
rs59257707 | 1.00[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs59902911 | 0.83[AMR][1000 genomes];0.82[EUR][1000 genomes] |
Symbol | Regulation type |
---|---|
PMPCA | Proximal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014