SNP Report

Basic Infomation

Name	rs10875955 dbSNP
Location	chr:12,49814308
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 37)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10783314	0.81[AFR][1000 genomes];0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10875958	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs11169005	0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11169008	0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11169014	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11169015	0.83[AMR][1000 genomes]
rs11169016	0.83[AMR][1000 genomes]
rs11169017	0.83[AMR][1000 genomes]
rs11169027	0.83[AMR][1000 genomes]
rs11169043	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs11169045	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs11169058	0.82[AMR][1000 genomes]
rs11169059	0.82[AMR][1000 genomes]
rs11169063	0.83[EUR][1000 genomes]
rs11615710	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12296440	0.82[AMR][1000 genomes]
rs12299282	0.83[AMR][1000 genomes]
rs12301632	0.83[AMR][1000 genomes]
rs12306118	0.83[AMR][1000 genomes]
rs12306212	0.83[AMR][1000 genomes]
rs12306645	0.83[AMR][1000 genomes]
rs12320284	0.83[AMR][1000 genomes]
rs57601151	0.83[AMR][1000 genomes]
rs58125498	0.87[EUR][1000 genomes]
rs60808917	0.82[AMR][1000 genomes]
rs6580708	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6580715	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7132684	0.83[AMR][1000 genomes]
rs7133398	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs7139061	0.82[AMR][1000 genomes]
rs7295556	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7488923	0.81[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7962951	0.83[AMR][1000 genomes]
rs7970059	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7974420	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7975712	0.90[EUR][1000 genomes]
rs7980731	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
SPATS2	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)