SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 9)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1015390	0.81[CHB][hapmap];0.94[JPT][hapmap];0.89[ASN][1000 genomes]
rs11168324	0.81[ASN][1000 genomes]
rs11541194	0.91[ASN][1000 genomes]
rs11561406	0.89[ASN][1000 genomes]
rs12721416	1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs12721420	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4073729	0.80[ASN][1000 genomes]
rs4760608	0.93[CEU][hapmap];0.88[JPT][hapmap];0.93[EUR][1000 genomes]
rs4760673	0.88[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
TMEM106C	Distal transcriptional regulation
COL2A1	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)