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rVarBase
SNP Report
Basic Infomation
Name
rs4073729  
dbSNP
Location
chr:12,48337069
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 7)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs1015390
0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10875713
0.80[ASN][1000 genomes]
rs11168324
0.90[ASN][1000 genomes]
rs11541194
0.81[ASN][1000 genomes]
rs12721420
0.80[ASN][1000 genomes]
rs4393380
0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4583039
0.92[EUR][1000 genomes]
rSNP related genes
Symbol
Regulation type
VDR
Proximal transcriptional regulation
VDR
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)