SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 6)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1015390	0.82[JPT][hapmap]
rs10875713	0.93[CEU][hapmap];0.88[JPT][hapmap];0.93[EUR][1000 genomes]
rs12721416	0.88[JPT][hapmap]
rs12721420	0.87[CEU][hapmap];0.88[JPT][hapmap];0.91[TSI][hapmap];0.93[EUR][1000 genomes]
rs1793947	0.86[YRI][hapmap]
rs4760673	0.88[JPT][hapmap]

rSNP related genes

Symbol	Regulation type
COL2A1	Distal transcriptional regulation
COL2A1	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 2)

eQTL related gene	Source
LALBA	SCAN
PRPF40B	SCAN