SNP Report

Basic Infomation

Name	rs9989843 dbSNP
Location	chr:2,65382261
Allele	G/T

LD-proxy of rSNPs(r²>0.8) (count: 30)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10173422	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10173678	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10205598	0.88[ASN][1000 genomes]
rs11678917	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11684110	0.83[ASN][1000 genomes]
rs11888531	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11896168	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12713533	0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12713534	0.83[ASN][1000 genomes]
rs1894875	0.85[ASN][1000 genomes]
rs2422437	0.85[EUR][1000 genomes]
rs2422438	0.81[EUR][1000 genomes]
rs2422441	0.84[ASN][1000 genomes]
rs3732096	0.85[EUR][1000 genomes]
rs4671118	0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4671119	0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4671120	0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4671640	0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6546128	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6546129	0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6546130	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6546131	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6705891	0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6715178	0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6750146	0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6751786	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7563881	0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7565943	0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7585500	0.88[EUR][1000 genomes]
rs984748	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000200654	Proximal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)