SNP Report
Name | rs9888660   dbSNP |
---|---|
Location | chr:15,91160768 |
Allele | C/T |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10520692 | 0.85[AMR][1000 genomes];0.92[EUR][1000 genomes] |
rs11631439 | 0.81[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs11636571 | 0.81[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs11636695 | 0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs12909526 | 0.81[AMR][1000 genomes] |
rs17180057 | 1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs3743406 | 0.88[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs4261511 | 0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs4476150 | 0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs4641716 | 0.80[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs4932350 | 0.81[AMR][1000 genomes];0.88[EUR][1000 genomes] |
rs4932351 | 0.81[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs4932352 | 0.83[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs4932353 | 0.83[AMR][1000 genomes];0.85[EUR][1000 genomes] |
rs4932355 | 0.81[AMR][1000 genomes];0.91[EUR][1000 genomes] |
rs4932357 | 0.88[AMR][1000 genomes];0.94[EUR][1000 genomes] |
rs6496701 | 0.82[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs6496702 | 0.81[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs6496703 | 0.81[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs7163773 | 0.81[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs7165429 | 0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs7165476 | 0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs7171218 | 0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs8026218 | 0.87[EUR][1000 genomes] |
rs8026682 | 0.87[EUR][1000 genomes] |
rs8030781 | 0.81[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs8035793 | 0.85[AMR][1000 genomes];0.92[EUR][1000 genomes] |
Symbol | Regulation type |
---|---|
ENSG00000259314 | Proximal transcriptional regulation |
ENSG00000259314 | Distal transcriptional regulation |
CRTC3 | Distal transcriptional regulation |
CRTC3 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014