SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 24)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10036896	1.00[YRI][hapmap]
rs10039559	1.00[YRI][hapmap]
rs10067603	1.00[YRI][hapmap]
rs10069798	1.00[YRI][hapmap]
rs10076733	1.00[YRI][hapmap]
rs10077785	1.00[YRI][hapmap]
rs11739623	1.00[YRI][hapmap]
rs11741543	1.00[YRI][hapmap]
rs11744116	1.00[YRI][hapmap]
rs17715481	1.00[YRI][hapmap]
rs2057657	1.00[YRI][hapmap]
rs2158101	1.00[YRI][hapmap]
rs3792874	1.00[JPT][hapmap]
rs3792875	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs3792878	1.00[JPT][hapmap]
rs3792889	1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs3846729	1.00[YRI][hapmap]
rs41374148	1.00[MEX][hapmap]
rs4705959	1.00[YRI][hapmap]
rs6898380	1.00[ASN][1000 genomes]
rs7706762	1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7706873	1.00[ASW][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7723100	1.00[ASW][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7736810	0.83[AFR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000233006	Distal transcriptional regulation
SLC22A5	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)