SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 8)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11185932	0.82[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];0.95[JPT][hapmap];0.85[MKK][hapmap];0.83[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs11186029	0.81[CEU][hapmap];0.81[CHB][hapmap];0.85[JPT][hapmap];0.83[EUR][1000 genomes]
rs11186047	0.81[EUR][1000 genomes]
rs12248820	0.82[YRI][hapmap]
rs12267227	0.81[EUR][1000 genomes]
rs12412927	1.00[CEU][hapmap];0.90[CHB][hapmap];0.94[GIH][hapmap];0.95[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1902659	0.85[JPT][hapmap];0.81[EUR][1000 genomes]
rs4934351	0.81[GIH][hapmap]

rSNP related genes

Symbol	Regulation type
ENSG00000226659	Distal transcriptional regulation
SH2D4B	Distal transcriptional regulation
SH2D4B	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 2)

eQTL related gene	Source
LRFN4	SCAN
C10orf11	SCAN