SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 9)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11185932	0.80[JPT][hapmap]
rs11186029	0.95[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11186047	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12267227	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12412927	0.84[CHB][hapmap];0.90[JPT][hapmap];0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12571173	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4933445	0.84[EUR][1000 genomes]
rs59617064	0.83[EUR][1000 genomes]
rs9665686	0.85[JPT][hapmap];0.81[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
SH2D4B	Distal transcriptional regulation
SH2D4B	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)