SNP Report
Name | rs9652517   dbSNP |
---|---|
Location | chr:15,91144587 |
Allele | A/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10438437 | 0.95[CEU][hapmap];0.96[GIH][hapmap] |
rs10520692 | 0.90[CEU][hapmap] |
rs11631439 | 0.90[CEU][hapmap];0.89[MKK][hapmap] |
rs11636695 | 0.85[CEU][hapmap] |
rs12324504 | 0.80[AMR][1000 genomes];0.92[EUR][1000 genomes] |
rs12903655 | 0.94[CEU][hapmap];0.81[EUR][1000 genomes] |
rs12904055 | 0.95[CEU][hapmap];0.81[EUR][1000 genomes] |
rs12915979 | 0.87[GIH][hapmap] |
rs17180057 | 0.85[CEU][hapmap] |
rs34358242 | 0.80[EUR][1000 genomes] |
rs34759713 | 0.81[EUR][1000 genomes] |
rs3743406 | 0.85[CEU][hapmap] |
rs4244880 | 0.81[EUR][1000 genomes] |
rs4244882 | 0.81[EUR][1000 genomes] |
rs4352027 | 0.83[ASN][1000 genomes] |
rs4454949 | 0.90[CEU][hapmap];0.96[GIH][hapmap];0.82[TSI][hapmap];0.81[EUR][1000 genomes] |
rs4476150 | 0.81[CEU][hapmap] |
rs4609824 | 0.81[EUR][1000 genomes] |
rs4609825 | 0.81[EUR][1000 genomes] |
rs4932175 | 0.95[CEU][hapmap];0.81[EUR][1000 genomes] |
rs4932350 | 0.90[CEU][hapmap] |
rs4932351 | 0.90[CEU][hapmap] |
rs4932356 | 0.96[GIH][hapmap] |
rs5003701 | 0.81[ASN][1000 genomes] |
rs6496701 | 0.87[AFR][1000 genomes] |
rs6496703 | 0.89[CEU][hapmap] |
rs7163189 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs7165170 | 0.93[MEX][hapmap];0.80[MKK][hapmap] |
rs7165429 | 0.85[CEU][hapmap] |
rs7175560 | 0.80[EUR][1000 genomes] |
rs7176303 | 0.95[CEU][hapmap];0.80[EUR][1000 genomes] |
rs8026218 | 0.90[CEU][hapmap] |
rs8026682 | 0.87[ASW][hapmap];0.90[CEU][hapmap];0.95[LWK][hapmap];0.94[MKK][hapmap];0.88[YRI][hapmap];0.85[AFR][1000 genomes] |
rs8030781 | 0.90[CEU][hapmap] |
rs9652518 | 0.84[AMR][1000 genomes];0.94[EUR][1000 genomes] |
Symbol | Regulation type |
---|---|
ENSG00000259212 | Proximal transcriptional regulation |
CRTC3 | Distal transcriptional regulation |
ENSG00000259314 | Distal transcriptional regulation |
CRTC3 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014