SNP Report
Name | rs9509   dbSNP |
---|---|
Location | chr:20,44645153 |
Allele | T/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs12479823 | 0.87[EUR][1000 genomes] |
rs12480597 | 0.87[EUR][1000 genomes] |
rs12480942 | 0.82[EUR][1000 genomes] |
rs12481671 | 0.87[EUR][1000 genomes] |
rs13969 | 0.97[ASN][1000 genomes] |
rs35300540 | 0.87[EUR][1000 genomes] |
rs35804246 | 0.82[EUR][1000 genomes] |
rs3746514 | 0.87[EUR][1000 genomes] |
rs3746516 | 0.82[EUR][1000 genomes] |
rs3746517 | 0.82[EUR][1000 genomes] |
rs3746518 | 0.82[EUR][1000 genomes] |
rs3746519 | 0.82[EUR][1000 genomes] |
rs3746520 | 0.82[EUR][1000 genomes] |
rs3848723 | 0.87[EUR][1000 genomes] |
rs3848724 | 0.87[EUR][1000 genomes] |
rs3918273 | 0.87[EUR][1000 genomes] |
rs3918274 | 0.87[EUR][1000 genomes] |
rs3918275 | 0.92[AFR][1000 genomes] |
rs4810483 | 0.82[EUR][1000 genomes] |
rs4812984 | 0.87[EUR][1000 genomes] |
rs4812985 | 0.82[EUR][1000 genomes] |
rs57489591 | 0.87[EUR][1000 genomes] |
rs60551459 | 0.87[EUR][1000 genomes] |
rs6094237 | 0.95[ASN][1000 genomes] |
rs61088297 | 0.87[EUR][1000 genomes] |
rs61601349 | 0.87[EUR][1000 genomes] |
Symbol | Regulation type |
---|---|
MMP9 | Proximal transcriptional regulation |
ZNF335 | Distal transcriptional regulation |
NCOA5 | Distal transcriptional regulation |
SLC12A5 | Distal transcriptional regulation |
ENSG00000204044 | Distal transcriptional regulation |
ENSG00000240742 | Distal transcriptional regulation |
ENSG00000204044 | RNA binding protein mediated regulation |
MMP9 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014