SNP Report

Basic Infomation

Name	rs884367 dbSNP
Location	chr:17,5487164
Allele	C/G

LD-proxy of rSNPs(r²>0.8) (count: 24)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10459913	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11652873	0.86[CHB][hapmap];0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11653896	1.00[CEU][hapmap]
rs11657158	0.83[AFR][1000 genomes]
rs11657455	1.00[YRI][hapmap];0.83[AFR][1000 genomes]
rs11658667	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12602431	1.00[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs2175827	1.00[YRI][hapmap];0.83[AFR][1000 genomes]
rs34293306	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs35052285	0.92[AFR][1000 genomes];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs3744717	1.00[YRI][hapmap];0.83[AFR][1000 genomes]
rs4145810	0.87[CHB][hapmap];0.82[JPT][hapmap];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4790268	0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4790780	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4790785	1.00[CHB][hapmap];0.90[JPT][hapmap];0.92[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4790793	0.86[CHB][hapmap];0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs67238881	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs72827635	0.83[AFR][1000 genomes]
rs8072160	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs8081956	1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs871928	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs907874	0.87[CHB][hapmap];0.82[JPT][hapmap];0.92[AFR][1000 genomes];0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs907876	0.86[CHB][hapmap];0.82[JPT][hapmap];0.92[AFR][1000 genomes];0.87[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs9674729	0.83[AFR][1000 genomes]

rSNP related genes

Symbol	Regulation type
IFRD1	Distal transcriptional regulation
NLRP1	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)