SNP Report
Name | rs34293306   dbSNP |
---|---|
Location | chr:17,5524253 |
Allele | T/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10459913 | 0.85[EUR][1000 genomes] |
rs11652873 | 0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs11658667 | 0.88[AMR][1000 genomes];0.85[EUR][1000 genomes] |
rs35052285 | 0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs4145810 | 0.81[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs4790268 | 0.82[AMR][1000 genomes];0.84[EUR][1000 genomes] |
rs4790780 | 0.88[AMR][1000 genomes];0.84[EUR][1000 genomes] |
rs4790785 | 1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs4790793 | 0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs4790800 | 0.89[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs67238881 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs8072160 | 0.81[AMR][1000 genomes];0.85[EUR][1000 genomes] |
rs8081956 | 0.95[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs871928 | 0.85[AMR][1000 genomes];0.85[EUR][1000 genomes] |
rs884367 | 0.87[AMR][1000 genomes];0.85[EUR][1000 genomes] |
rs907874 | 0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs907876 | 0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
NLRP1 | Proximal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014