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rVarBase
SNP Report
Basic Infomation
Name
rs8067690  
dbSNP
Location
chr:17,40553753
Allele
T/G/C
LD-proxy of rSNPs(r
2
>0.8) (count: 13)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs1129422
0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12150088
0.81[ASN][1000 genomes]
rs12453307
0.81[ASN][1000 genomes]
rs34154026
0.81[ASN][1000 genomes]
rs4365333
0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs56364076
0.81[ASN][1000 genomes]
rs709631
0.83[ASN][1000 genomes]
rs7222712
0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs72823047
0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8078850
0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs963986
0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs963987
0.81[ASN][1000 genomes]
rs963988
0.81[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
STAT3
Distal transcriptional regulation
PTRF
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)