SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 16)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1129422	0.83[ASN][1000 genomes]
rs11653437	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12150088	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12453307	0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2128786	0.83[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs2883456	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs34154026	0.89[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4365333	0.81[ASN][1000 genomes]
rs56364076	0.89[AFR][1000 genomes];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7222712	0.81[ASN][1000 genomes]
rs72823047	0.81[ASN][1000 genomes]
rs8067690	0.83[ASN][1000 genomes]
rs8078850	0.83[ASN][1000 genomes]
rs963986	0.81[ASN][1000 genomes]
rs963987	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs963988	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
PTRF	Proximal transcriptional regulation
STAT3	Distal transcriptional regulation
PTRF	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)