SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 13)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1129422	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12150088	0.83[ASN][1000 genomes]
rs12453307	0.83[ASN][1000 genomes]
rs34154026	0.83[ASN][1000 genomes]
rs4365333	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56364076	0.83[ASN][1000 genomes]
rs709631	0.81[ASN][1000 genomes]
rs7222712	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8067690	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8078850	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs963986	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs963987	0.83[ASN][1000 genomes]
rs963988	0.83[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
PTRF	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)