SNP Report
Basic Infomation
| Name | rs7960023 dbSNP |
|---|---|
| Location | chr:12,40329432 |
| Allele | A/C |
LD-proxy of rSNPs(r2>0.8) (count: 24)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10877823 | 0.98[AFR][1000 genomes];0.82[EUR][1000 genomes];0.98[ASN][1000 genomes] |
| rs10877832 | 0.91[ASN][1000 genomes] |
| rs10877836 | 0.91[ASN][1000 genomes] |
| rs10877837 | 0.87[AFR][1000 genomes] |
| rs10877840 | 0.90[ASN][1000 genomes] |
| rs11174315 | 0.92[ASN][1000 genomes] |
| rs11174338 | 0.92[ASN][1000 genomes] |
| rs11174351 | 0.92[ASN][1000 genomes] |
| rs11174374 | 0.92[ASN][1000 genomes] |
| rs11559994 | 1.00[AFR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes] |
| rs11564285 | 0.91[ASN][1000 genomes] |
| rs12230558 | 0.91[ASN][1000 genomes] |
| rs2132747 | 0.90[ASN][1000 genomes] |
| rs28370600 | 0.91[ASN][1000 genomes] |
| rs61931461 | 0.91[ASN][1000 genomes] |
| rs7136390 | 0.90[ASN][1000 genomes] |
| rs7297783 | 0.92[ASN][1000 genomes] |
| rs7305863 | 0.90[ASN][1000 genomes] |
| rs7312341 | 0.90[ASN][1000 genomes] |
| rs7316296 | 0.92[ASN][1000 genomes] |
| rs7966222 | 0.83[ASN][1000 genomes] |
| rs7973509 | 0.90[ASN][1000 genomes] |
| rs7974169 | 0.90[ASN][1000 genomes] |
| rs7976837 | 0.83[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| SLC2A13 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014