SNP Report
Name | rs7526353   dbSNP |
---|---|
Location | chr:1,200988256 |
Allele | C/T |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10494827 | 0.84[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs10753887 | 1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs10800751 | 0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs10920090 | 0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs10920094 | 0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs10920099 | 0.87[AMR][1000 genomes];0.94[EUR][1000 genomes] |
rs11583140 | 0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs2297906 | 0.82[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs6427870 | 0.84[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs6427871 | 0.96[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs6656481 | 0.96[ASN][1000 genomes] |
rs6675915 | 0.83[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs6687260 | 0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs6700264 | 0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs6701469 | 0.96[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs957957 | 0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
ENSG00000229191 | Proximal transcriptional regulation |
C1orf106 | Distal transcriptional regulation |
ASCL5 | Distal transcriptional regulation |
KIF21B | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014