SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 17)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10494827	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10753887	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10800752	0.83[AMR][1000 genomes]
rs10920090	0.85[EUR][1000 genomes]
rs10920094	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs10920099	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11583140	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs11807626	0.82[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2297906	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6427870	0.92[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6427871	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6675915	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6687260	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs6700264	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6701469	0.84[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7526353	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs957957	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000234132	Proximal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)