SNP Report

Basic Infomation

Name	rs73786688 dbSNP
Location	chr:5,130830052
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 49)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11242071	0.83[AMR][1000 genomes]
rs11242072	0.83[AMR][1000 genomes]
rs12108740	1.00[AMR][1000 genomes]
rs12108819	1.00[AMR][1000 genomes]
rs12108829	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12108954	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12109782	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12110164	1.00[AMR][1000 genomes]
rs12110184	0.83[AMR][1000 genomes]
rs17167682	1.00[AMR][1000 genomes]
rs17167683	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4526097	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55642088	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55734376	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55750965	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55923765	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55939271	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56100851	0.89[AFR][1000 genomes]
rs56163891	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56225468	0.82[AFR][1000 genomes]
rs56235343	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56262921	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56693198	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57157881	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57505395	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57623245	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58583866	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58816971	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58993531	0.85[AFR][1000 genomes]
rs60418447	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61122547	0.94[AFR][1000 genomes]
rs61216813	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6859517	1.00[AMR][1000 genomes]
rs6869375	1.00[AMR][1000 genomes]
rs6878276	1.00[AMR][1000 genomes]
rs6897507	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73786670	1.00[AMR][1000 genomes]
rs73786687	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73786694	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73788706	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73788710	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73788711	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73788713	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73788715	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73788724	0.82[AFR][1000 genomes]
rs73788729	0.82[AFR][1000 genomes]
rs7730790	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9784609	1.00[AMR][1000 genomes]
rs9784615	1.00[AMR][1000 genomes]

rSNP related genes

Symbol	Regulation type
RAPGEF6	RNA binding protein mediated regulation
FNIP1	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)