SNP Report

Basic Infomation

Name	rs7306877 dbSNP
Location	chr:12,50001705
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 76)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1049986	0.80[ASN][1000 genomes]
rs10875964	0.83[ASN][1000 genomes]
rs10875968	0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11169070	0.83[AMR][1000 genomes]
rs11169080	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11169081	0.83[AMR][1000 genomes]
rs11169082	0.83[AMR][1000 genomes]
rs11169092	0.83[AMR][1000 genomes]
rs11169101	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11169104	0.83[ASN][1000 genomes]
rs11169106	0.83[ASN][1000 genomes]
rs11169109	0.83[ASN][1000 genomes]
rs11169111	0.83[ASN][1000 genomes]
rs11169112	0.83[ASN][1000 genomes]
rs11169118	0.83[ASN][1000 genomes]
rs11169133	0.83[ASN][1000 genomes]
rs11169140	0.86[EUR][1000 genomes]
rs11833411	0.83[AMR][1000 genomes]
rs11834380	0.83[ASN][1000 genomes]
rs12296586	0.83[ASN][1000 genomes]
rs12301824	0.83[ASN][1000 genomes]
rs12303310	0.83[ASN][1000 genomes]
rs12308256	0.80[ASN][1000 genomes]
rs12310510	0.83[ASN][1000 genomes]
rs12314795	0.83[ASN][1000 genomes]
rs12315224	0.83[ASN][1000 genomes]
rs12316284	0.80[ASN][1000 genomes]
rs12320556	0.83[AMR][1000 genomes]
rs1470906	0.83[ASN][1000 genomes]
rs1574326	0.83[ASN][1000 genomes]
rs2005195	0.83[AMR][1000 genomes]
rs2336058	0.83[ASN][1000 genomes]
rs2878532	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs3887727	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4045193	0.83[AMR][1000 genomes]
rs4073998	0.89[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs4133070	0.83[ASN][1000 genomes]
rs4563	0.83[ASN][1000 genomes]
rs4584654	0.83[ASN][1000 genomes]
rs55812050	0.83[ASN][1000 genomes]
rs57191490	0.80[ASN][1000 genomes]
rs57342147	0.83[ASN][1000 genomes]
rs57965817	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs59233136	0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs60121503	0.80[ASN][1000 genomes]
rs61512987	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs61616163	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs61620972	0.83[ASN][1000 genomes]
rs7131915	0.81[AMR][1000 genomes]
rs7136052	0.83[ASN][1000 genomes]
rs7137976	0.83[ASN][1000 genomes]
rs7296281	0.83[AMR][1000 genomes]
rs7299002	0.83[ASN][1000 genomes]
rs7299609	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs7309607	0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7312658	0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs73305085	0.80[ASN][1000 genomes]
rs73306808	0.83[ASN][1000 genomes]
rs74089182	0.80[ASN][1000 genomes]
rs7688	0.80[ASN][1000 genomes]
rs7952734	0.83[ASN][1000 genomes]
rs7954994	0.83[ASN][1000 genomes]
rs7955586	0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7956089	0.83[ASN][1000 genomes]
rs7956181	0.83[ASN][1000 genomes]
rs7962645	0.83[ASN][1000 genomes]
rs7962863	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7963954	0.93[ASN][1000 genomes]
rs7967624	0.80[ASN][1000 genomes]
rs7979262	0.83[ASN][1000 genomes]
rs7979285	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7980979	0.83[ASN][1000 genomes]
rs8626	0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs876889	0.83[AMR][1000 genomes]
rs897056	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9804749	0.83[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
FAM186B	Proximal transcriptional regulation
PRPF40B	Distal transcriptional regulation
FAM186B	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)