SNP Report

Basic Infomation

Name	rs715403 dbSNP
Location	chr:12,40731183
Allele	A/C

LD-proxy of rSNPs(r²>0.8) (count: 29)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10506155	0.92[CHB][hapmap];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10784451	0.92[CHB][hapmap]
rs10784532	0.92[CHB][hapmap];0.81[JPT][hapmap];0.86[YRI][hapmap];0.82[AFR][1000 genomes];0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10878278	0.84[CHB][hapmap]
rs10878343	0.92[CHB][hapmap];0.84[ASN][1000 genomes]
rs10878356	0.92[CHB][hapmap];0.84[ASN][1000 genomes]
rs10878372	0.92[CHB][hapmap];0.80[ASN][1000 genomes]
rs11175843	0.92[CHB][hapmap]
rs11175935	0.92[CHB][hapmap]
rs11175958	0.92[CHB][hapmap];0.84[ASN][1000 genomes]
rs11175966	0.92[CHB][hapmap];0.84[ASN][1000 genomes]
rs11176118	0.92[CHB][hapmap];0.85[ASN][1000 genomes]
rs11176153	0.92[CHB][hapmap];0.82[ASN][1000 genomes]
rs11176154	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11176165	0.93[AFR][1000 genomes];0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11176418	0.84[CHB][hapmap]
rs12368229	0.92[CHB][hapmap];0.80[ASN][1000 genomes]
rs17444223	0.92[CHB][hapmap]
rs17444730	0.84[CHB][hapmap]
rs17462055	0.92[CHB][hapmap];0.82[ASN][1000 genomes]
rs2162471	0.92[CHB][hapmap];0.85[ASN][1000 genomes]
rs2723264	0.92[CHB][hapmap]
rs61915610	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7132187	0.92[CHB][hapmap];0.81[JPT][hapmap];0.86[YRI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7137173	0.92[CHB][hapmap];0.80[ASN][1000 genomes]
rs7303525	0.92[CHB][hapmap];0.82[ASN][1000 genomes]
rs7311850	0.92[CHB][hapmap]
rs7966550	0.92[CHB][hapmap]
rs7969677	0.92[CHB][hapmap]

rSNP related genes

Symbol	Regulation type
LRRK2	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)