SNP Report
Basic Infomation
| Name | rs7093658 dbSNP |
|---|---|
| Location | chr:10,93657377 |
| Allele | C/T |
LD-proxy of rSNPs(r2>0.8) (count: 33)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10736066 | 0.90[ASN][1000 genomes] |
| rs10748570 | 0.80[AMR][1000 genomes];0.87[EUR][1000 genomes] |
| rs1107947 | 0.82[ASN][1000 genomes] |
| rs11812701 | 1.00[CHB][hapmap] |
| rs11816821 | 1.00[CHB][hapmap] |
| rs11817266 | 1.00[CHB][hapmap] |
| rs11818046 | 1.00[CHB][hapmap] |
| rs11819184 | 1.00[CHB][hapmap] |
| rs1417257 | 0.90[ASN][1000 genomes] |
| rs1538832 | 0.90[ASN][1000 genomes] |
| rs17347260 | 0.90[ASN][1000 genomes] |
| rs17349172 | 0.82[ASN][1000 genomes] |
| rs17364211 | 0.89[ASN][1000 genomes] |
| rs17433251 | 0.90[ASN][1000 genomes] |
| rs1772186 | 0.90[ASN][1000 genomes] |
| rs1772188 | 0.90[ASN][1000 genomes] |
| rs2258946 | 0.89[ASW][hapmap];0.84[MEX][hapmap];0.90[ASN][1000 genomes] |
| rs2421705 | 0.90[ASN][1000 genomes] |
| rs2421706 | 0.90[ASN][1000 genomes] |
| rs4565820 | 0.89[ASN][1000 genomes] |
| rs61874749 | 0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes] |
| rs61874751 | 0.82[ASN][1000 genomes] |
| rs6583792 | 0.90[ASN][1000 genomes] |
| rs7072906 | 1.00[CHB][hapmap] |
| rs7089495 | 0.92[MEX][hapmap];0.90[ASN][1000 genomes] |
| rs7095552 | 0.82[ASN][1000 genomes] |
| rs72807234 | 0.89[ASN][1000 genomes] |
| rs72807240 | 0.89[ASN][1000 genomes] |
| rs72807242 | 0.89[ASN][1000 genomes] |
| rs7897761 | 0.82[ASN][1000 genomes] |
| rs7899706 | 0.89[ASN][1000 genomes] |
| rs7912830 | 0.92[MEX][hapmap];0.90[ASN][1000 genomes] |
| rs833363 | 0.89[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| FGFBP3 | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 5)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014