SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 15)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10736066	1.00[CEU][hapmap];1.00[CHB][hapmap];0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1417256	0.81[CEU][hapmap]
rs1417257	0.83[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1538832	1.00[ASN][1000 genomes]
rs17347260	1.00[ASN][1000 genomes]
rs17433251	1.00[ASN][1000 genomes]
rs1772186	1.00[ASN][1000 genomes]
rs1772188	1.00[CHB][hapmap];0.88[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2258946	0.81[ASW][hapmap];1.00[CHB][hapmap];0.92[MEX][hapmap];0.88[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2421705	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2421706	1.00[CHB][hapmap];1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61874749	0.81[ASN][1000 genomes]
rs6583792	1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7093658	0.92[MEX][hapmap];0.90[ASN][1000 genomes]
rs7912830	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
FGFBP3	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 3)