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rVarBase
SNP Report
Basic Infomation
Name
rs1417256  
dbSNP
Location
chr:10,93649884
Allele
A/C
LD-proxy of rSNPs(r
2
>0.8) (count: 14)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10736066
0.81[CEU][hapmap]
rs10881982
0.87[JPT][hapmap]
rs10881990
0.93[JPT][hapmap]
rs10881991
0.93[JPT][hapmap]
rs11186734
1.00[JPT][hapmap]
rs1538831
0.81[CEU][hapmap];0.93[CHB][hapmap];0.87[JPT][hapmap]
rs2421705
0.81[CEU][hapmap]
rs6583792
0.81[CEU][hapmap]
rs6583794
0.92[JPT][hapmap]
rs7083959
0.81[CEU][hapmap];0.93[CHB][hapmap];0.87[JPT][hapmap]
rs7089495
0.81[CEU][hapmap]
rs7099658
0.93[JPT][hapmap]
rs7912830
0.81[CEU][hapmap]
rs7919192
0.92[JPT][hapmap]
rSNP related genes
Symbol
Regulation type
FGFBP3
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)