SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 18)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10748571	0.86[ASN][1000 genomes]
rs10881982	0.92[CHB][hapmap];0.86[JPT][hapmap]
rs10881990	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.88[GIH][hapmap];0.93[JPT][hapmap];0.95[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10881991	1.00[CEU][hapmap];0.83[CHB][hapmap];0.96[CHD][hapmap];1.00[GIH][hapmap];0.93[JPT][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10881992	0.94[ASN][1000 genomes]
rs10881993	0.81[ASN][1000 genomes]
rs10881994	0.93[ASN][1000 genomes]
rs11186735	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11186736	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11186737	0.87[CHD][hapmap];0.82[ASN][1000 genomes]
rs12220410	0.93[ASN][1000 genomes]
rs1417256	1.00[JPT][hapmap]
rs1538831	0.86[JPT][hapmap]
rs6583794	0.83[CHD][hapmap];0.92[JPT][hapmap]
rs7083959	0.86[JPT][hapmap]
rs7099658	0.91[CHD][hapmap];0.93[JPT][hapmap];0.83[ASN][1000 genomes]
rs7914295	0.81[ASN][1000 genomes]
rs7919192	0.96[CHD][hapmap];0.92[JPT][hapmap];0.81[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
FGFBP3	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 7)