SNP Report
Basic Infomation
| Name | rs10881982 dbSNP |
|---|---|
| Location | chr:10,93614996 |
| Allele | T/A |
LD-proxy of rSNPs(r2>0.8) (count: 16)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10881990 | 0.92[CHB][hapmap];0.93[JPT][hapmap] |
| rs11186679 | 1.00[CEU][hapmap];0.81[EUR][1000 genomes] |
| rs11186698 | 0.89[ASN][1000 genomes] |
| rs11186728 | 0.90[EUR][1000 genomes];0.81[ASN][1000 genomes] |
| rs11186734 | 0.92[CHB][hapmap];0.86[JPT][hapmap] |
| rs1417256 | 0.87[JPT][hapmap] |
| rs1538831 | 1.00[JPT][hapmap];0.90[ASN][1000 genomes] |
| rs1630388 | 0.90[ASN][1000 genomes] |
| rs1770469 | 0.90[ASN][1000 genomes] |
| rs1772187 | 0.90[ASN][1000 genomes] |
| rs3802649 | 0.80[AMR][1000 genomes];0.89[ASN][1000 genomes] |
| rs41286942 | 0.85[EUR][1000 genomes] |
| rs7083959 | 1.00[JPT][hapmap];0.90[ASN][1000 genomes] |
| rs7919192 | 0.84[JPT][hapmap] |
| rs9420573 | 0.90[ASN][1000 genomes] |
| rs9633689 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| FGFBP3 | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014