SNP Report
Basic Infomation
| Name | rs6758819 dbSNP |
|---|---|
| Location | chr:2,65386462 |
| Allele | G/A |
LD-proxy of rSNPs(r2>0.8) (count: 49)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10173422 | 0.83[ASN][1000 genomes] |
| rs10173678 | 0.83[ASN][1000 genomes] |
| rs10185243 | 0.83[ASN][1000 genomes] |
| rs10195785 | 0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs10205598 | 0.87[ASN][1000 genomes] |
| rs11126028 | 0.81[ASN][1000 genomes] |
| rs11126029 | 0.81[ASN][1000 genomes] |
| rs11678917 | 0.83[ASN][1000 genomes] |
| rs11684110 | 0.82[ASN][1000 genomes] |
| rs11888531 | 0.86[ASN][1000 genomes] |
| rs11893423 | 0.81[ASN][1000 genomes] |
| rs11896168 | 0.81[ASN][1000 genomes] |
| rs12465024 | 0.81[ASN][1000 genomes] |
| rs12472718 | 0.82[ASN][1000 genomes] |
| rs12713532 | 0.81[ASN][1000 genomes] |
| rs12713533 | 0.82[ASN][1000 genomes] |
| rs12713534 | 0.81[ASN][1000 genomes] |
| rs13005414 | 0.81[ASN][1000 genomes] |
| rs13421845 | 0.81[ASN][1000 genomes] |
| rs1420185 | 0.80[ASN][1000 genomes] |
| rs17040050 | 0.81[ASN][1000 genomes] |
| rs1894875 | 0.83[ASN][1000 genomes] |
| rs2052261 | 0.82[ASN][1000 genomes] |
| rs2302631 | 0.81[ASN][1000 genomes] |
| rs2422436 | 0.80[ASN][1000 genomes] |
| rs2422441 | 0.84[ASN][1000 genomes] |
| rs4671116 | 0.81[ASN][1000 genomes] |
| rs4671117 | 0.81[EUR][1000 genomes];0.83[ASN][1000 genomes] |
| rs4671118 | 0.81[ASN][1000 genomes] |
| rs4671119 | 0.81[ASN][1000 genomes] |
| rs4671120 | 0.83[ASN][1000 genomes] |
| rs4671640 | 0.80[ASN][1000 genomes] |
| rs60136636 | 0.81[ASN][1000 genomes] |
| rs6546128 | 0.83[ASN][1000 genomes] |
| rs6546129 | 0.83[ASN][1000 genomes] |
| rs6546130 | 0.81[ASN][1000 genomes] |
| rs6546131 | 0.86[ASN][1000 genomes] |
| rs6705891 | 0.83[ASN][1000 genomes] |
| rs6713746 | 0.81[ASN][1000 genomes] |
| rs6715178 | 0.86[ASN][1000 genomes] |
| rs6730986 | 0.81[ASN][1000 genomes] |
| rs6750146 | 0.88[ASN][1000 genomes] |
| rs6756585 | 0.81[ASN][1000 genomes] |
| rs7563881 | 0.88[ASN][1000 genomes] |
| rs7565943 | 0.86[ASN][1000 genomes] |
| rs7579489 | 0.81[ASN][1000 genomes] |
| rs7590690 | 0.81[ASN][1000 genomes] |
| rs9797989 | 0.81[ASN][1000 genomes] |
| rs984748 | 0.83[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| RAB1A | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014