SNP Report
Name | rs6670477   dbSNP |
---|---|
Location | chr:1,155861810 |
Allele | C/T |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10796955 | 0.80[AMR][1000 genomes] |
rs10908483 | 0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs12026057 | 0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs12037177 | 0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs12080846 | 0.80[AFR][1000 genomes] |
rs12144175 | 0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs1889532 | 0.80[AMR][1000 genomes] |
rs1889533 | 0.80[AMR][1000 genomes] |
rs2016251 | 0.87[AMR][1000 genomes];0.88[EUR][1000 genomes] |
rs2282301 | 0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs2297649 | 0.80[AMR][1000 genomes] |
rs66466805 | 0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs66669006 | 0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs6667652 | 0.88[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs6696019 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs72708205 | 0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs7528441 | 0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs7545308 | 0.95[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs867548 | 0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs867549 | 0.98[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs867550 | 0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs915181 | 0.80[AFR][1000 genomes];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes] |
Symbol | Regulation type |
---|---|
ENSG00000201614 | Proximal transcriptional regulation |
GON4L | Distal transcriptional regulation |
SYT11 | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014